genehunter man page (version 1.1, dec 1996)


DUMP IBD

Summary: dump the ibd distribution to a text file
No Arguments

This command allows you to output the calculated likelihood of sharing 0, 1 or 2 alleles for each relative pair within each pedigree, possibly for use in another program. (You will be queried for the filename to store it in.)

The output format is:

< pos > < pedigree > < indiv1-indiv2 > < priorz0 > < priorz1 > < priorz2 > < z0 > < z1 > < z2 >
This command has been expanded from the original MAPMAKER/SIBS command to include all non-founder relative pairs (regardless of relationship or affected status).